Insertion junction: CLIP2.024515_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024515
Chromosome:mitogenome
Location:8131
Confidence (%):80
Locus systematic id Locus common name Defline Feature
CreMt.g802342 nad6,801500,ChrepMp06 (1 of 1) K03884 - NADH-ubiquinone oxidoreductase chain 6 (ND6); NADH dehydrogenase subunit 6 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATTGGCTGTACTATTCCTATTCGTAATTATGCTACTAGAGATCCCAG
Internal bar code:TTTGCAGCCGTGATGGGGATCC

Confirmation - LEAP-Seq

LEAP-Seq distance:752
LEAP-Seq percent confirming:5.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCGAGCATCCTATGAG
Suggested primer 2:GCTTTGTGCGCTGTTAGCTT