Insertion junction: CLIP2.024521_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024521
Chromosome:chromosome 6
Location:5742127
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g288550 ECP76 76 kDa extracellular polypeptide; (1 of 5) PF06742//PF06863 - Protein of unknown function (DUF1214) (DUF1214) // Protein of unknown function (DUF1254) (DUF1254) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCAGCCTGCGAAGCGAAGGGTGCGTGTGGCAAAATGCCACGCACCGTAT
Internal bar code:ACGGTAGGGTGTGCCCAGCAAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1834
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTGCAAAACACCTTCGGTCC
Suggested primer 2:CAACTCGTGTGATGGGTCCA