Insertion junction: CLIP2.024523_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024523
Chromosome:chromosome 8
Location:2090748
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g369400 (1 of 1) PTHR12356:SF18 - NUDC DOMAIN-CONTAINING PROTEIN 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGATGTCTGTGGGCGTGTGTAAAAAACGTGGTGCCGCAGGGTGAGCCG
Internal bar code:GAATATAGGGTCGTCGTTGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2339
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTACAGCCACACCCCATG
Suggested primer 2:GCGTACCTAGACGTGAGAGC