Insertion junction: CLIP2.024531_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024531
Chromosome:chromosome 13
Location:2763347
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g582270 FFT3 putative fructan fructosyltransferase; (1 of 1) IPR001362//IPR013148//IPR023296 - Glycoside hydrolase, family 32 // Glycosyl hydrolase family 32, N-terminal // Glycosyl hydrolase, five-bladed beta-propellor domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCAGACCCTCATAACGCCAGCCGCTGTCGCCACCACCTCCACCGCCAACT
Internal bar code:GAGATGATGGTGTTTTTATGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2076
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTAGTGACGATGACTGGG
Suggested primer 2:TCACCGGCATCATCACCATC