Insertion junction: CLIP2.024537_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024537
Chromosome:chromosome 6
Location:8364396
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307650 (1 of 1) PF12138 - Spherulation-specific family 4 (Spherulin4) outside_mRNA
Cre06.g307700 (1 of 6) 2.7.7.84 - 2'-5' oligoadenylate synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGGGCCATCCATGGCAAGCGCGCTCCAGACCAGGCTGGCGGTCGGCA
Internal bar code:TGTCAAGGCACGGTCTGTACGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1092
LEAP-Seq percent confirming:89.3617
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTGCTGCATACATAGGGT
Suggested primer 2:TCCACGATGTCCCAGGATCT