Insertion junction: CLIP2.024547_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024547
Chromosome:chromosome 11
Location:3562872
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g477950 (1 of 1) IPR000104//IPR005502 - Antifreeze protein, type I // ADP-ribosylation/Crystallin J1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGGGGGCGCTCCATGATTGCGGAGGCCTGGGCACCCCATGCCCTGCCCG
Internal bar code:AACCGGAGTGAACGGAATGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:431
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCTCCCAGCTCTCTTACA
Suggested primer 2:TGTCAGCTTGAGCAGTGGAG