Insertion junction: CLIP2.024554_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.024554
Chromosome:chromosome 16
Location:628491
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g691950 (1 of 6) IPR006502//IPR011333 - Protein of unknown function PDDEXK-like // POZ domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACGCAGCATCAGCATCCTGACCGTCACCCTTCCCTCGATGATGTATTTG
Internal bar code:GCGAAATAAAGGATCGATGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1783
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATTGCCCGGTACAGAAT
Suggested primer 2:ACAGTTATACGCCCGCTAGC