Insertion junction: CLIP2.024556_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024556
Chromosome:chromosome 1
Location:2981076
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018700 (1 of 140) IPR002048 - EF-hand domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCCCCCACCTGCCACACTGGCCGACAACGTGAACACGTGCTCCAGCCG
Internal bar code:GGGGGTGTCCGTAATATGTGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1183
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TACTGCGCCAAGTGGAACAA
Suggested primer 2:TGCAGCGAGACCCAGAATTT