Insertion junction: CLIP2.024557_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.024557
Chromosome:chromosome 8
Location:1393462
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g364200 (1 of 70) PF07282 - Putative transposase DNA-binding domain (OrfB_Zn_ribbon) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACCCAGCGATGTCACCAACCACCAATTCCATGGGTTTCATTGCCATGC
Internal bar code:GTAATCCAATCATAAGTGTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:4394
LEAP-Seq percent confirming:74.0
LEAP-Seq n confirming:37
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CACACAGTTCCGCAGTGTTG
Suggested primer 2:CTCAAGGCGAATCCCCTGTT