Insertion junction: CLIP2.024560_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024560
Chromosome:chromosome 9
Location:1180518
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g401050 (1 of 12) 2.7.11.18 - [Myosin light-chain] kinase / Smooth-muscle-myosin-light-chain kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGAGGCTCGGGCCAACCAGTGCTCGTGTGACAGCAACAGGGCCGTCACA
Internal bar code:TTACACATTATCTTACGTGGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2769
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:68

Suggested primers for confirmation by PCR

Suggested primer 1:GCAGCGGCAACATGATTAGG
Suggested primer 2:GATTTGCGATTGACGTCCCG