Insertion junction: CLIP2.024579_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024579
Chromosome:chromosome 5
Location:2562572
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g239500 FAP38 (1 of 1) IPR000104//IPR009068 - Antifreeze protein, type I // S15/NS1, RNA-binding; Flagellar Associated Protein 38 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCGCGACATTCCTAGCGCTCGCCCCGCTCCCGCATCTTTTCCCGCTCCT
Internal bar code:TTGCGATTACATGCATAAGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:58
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:GGGAGGGAGAAAGAAAGGGC
Suggested primer 2:GGTGGATGTAAGGGTGGGTG