Insertion junction: CLIP2.024581_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024581
Chromosome:chromosome 13
Location:4574916
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g603400 SRH22 (1 of 1) PTHR10799//PTHR10799:SF695 - SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED // RING-FINGER, DEAD-LIKE HELICASE, PHD AND SNF2 DOMAIN-CONTAINING PROTEIN; SNF2-related DNA/RNA helicase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACCACCACCACCAACATAAACCCTCCACCACCCCTCACCACCACCC
Internal bar code:GAAGTGGATCATCTTACCACCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1599
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGATTTACCTGCTGCCCTGG
Suggested primer 2:CAAGGTGCACAACTTCCAGC