Insertion junction: CLIP2.024601_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024601
Chromosome:chromosome 17
Location:3138989
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g720700 ANK14 Predicted protein with ankyrin repeats; (1 of 7) PF12796//PF13637 - Ankyrin repeats (3 copies) (Ank_2) // Ankyrin repeats (many copies) (Ank_4) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCGCGTGTGCCCGCTGTACCTCTGGACGTCGGCACTTCACTTCTTAT
Internal bar code:TGAACGTTCGGACTCCTTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1561
LEAP-Seq percent confirming:91.3043
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTTTTGCCTTTGGTTCGG
Suggested primer 2:TGCGGGTTTTGGGGATCTAC