Insertion junction: CLIP2.024604_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024604
Chromosome:chromosome 12
Location:8393218
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g550350 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCTGGATCCAGATGATGACATCGCTGCTACAGCCGCCGAGCCGGCGGGC
Internal bar code:ACTCTGGATTTGGATGTTCAGT

Confirmation - LEAP-Seq

LEAP-Seq distance:490
LEAP-Seq percent confirming:3.0303
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTACAACCCCCACACGCA
Suggested primer 2:GAGGGGTGTGTGAGTGTGAG