Insertion junction: CLIP2.024608_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.024608
Chromosome:chromosome 13
Location:3693571
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588271 (1 of 1) PF07556 - Protein of unknown function (DUF1538) (DUF1538) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGGCGGCTGGCAGCAGCGTGCCGGCCTGGTCGCCCAGAGCCGTGAAG
Internal bar code:CGTTATATCATGCGGCTCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3650
LEAP-Seq percent confirming:96.6667
LEAP-Seq n confirming:29
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:CTGCCCATGATTCTGCTTGC
Suggested primer 2:CCTTTTCCACTGTTGCCAGC