Insertion junction: CLIP2.024636_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.024636
Chromosome:chromosome 6
Location:3481141
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278110 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATTCCTAATGCCATAGGCCCGAGGCTCTGCTGGAGCACGAGCTGTGTGA
Internal bar code:CGTTTCATTAAATTATGTAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:110
LEAP-Seq percent confirming:7.14286
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:TCACTGGCCATGACGTTACC
Suggested primer 2:GAGAGTTTGTGGGTCGCTCA