Insertion junction: CLIP2.024657_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024657
Chromosome:chromosome 9
Location:4174037
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g399663 FXL7,FXL4 FixL-like PAS domain protein; (1 of 11) PF13426 - PAS domain (PAS_9) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTGTCCGCCCAACATCCTCATTAACACCCAAGCCCAGCAGCACCAGCCC
Internal bar code:TTTGGCAGTCGACACGAATCCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1785
LEAP-Seq percent confirming:45.7143
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:19
LEAP-Seq n unique pos:35

Suggested primers for confirmation by PCR

Suggested primer 1:TGCATGCACCTTGTTTGCTC
Suggested primer 2:GGGTCACGGTTCCAAGACTT