Insertion junction: CLIP2.024668_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024668
Chromosome:chromosome 13
Location:1899440
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g575776 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGATTGCATGGCTTCCTGCTTAGCTTAGCGCTTTTGGCAGTGCGGAGGC
Internal bar code:TTGAGATTAGCATGCAATAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1506
LEAP-Seq percent confirming:97.9592
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:49

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGGTGACTGATCGGTGTG
Suggested primer 2:TCTGCCCTCAACAACATCCC