Insertion junction: CLIP2.024687_3

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024687
Chromosome:chromosome 10
Location:5648650
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g458950 IBA57 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGAAACTGCAGATGGCTATCGACGTGCGGAGAAACATGAACGCTGAGT
Internal bar code:TTCTCAGCTTTACGTCCGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:774
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTGATGGTGGGGATTCCGTG
Suggested primer 2:CTCAACGCCACAACCAACAG