Insertion junction: CLIP2.024705_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.024705
Chromosome:chromosome 3
Location:4049060
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171950 PPC2,PEPC2 (1 of 2) K01595 - phosphoenolpyruvate carboxylase (ppc); Phosphoenolpyruvate carboxylase 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCCACGCTCTCCTCCTCGCTCTTTTGCTCTGGCTTCGGTTCAGTTTG
Internal bar code:TAGAAGGTTAGCAGACCTCAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:2942
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGGCTTTCGTTTCGTTT
Suggested primer 2:AACCAATCCTGAGACTGGCG