Insertion junction: CLIP2.024707_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024707
Chromosome:chromosome 16
Location:2652769
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661450 HTV3 (1 of 35) K11253 - histone H3 (H3); Histone H3 variant CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCAAGTACCAGAAGTCCACAGACCTGCTCATCCGCAAGCTGCCCTTCT
Internal bar code:ATGGCTAAGCATTTATCTACGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1126
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCCAGTTGCATATCCTTG
Suggested primer 2:GTCGAAGCCAGTGAGTGTGA