Insertion junction: CLIP2.024717_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024717
Chromosome:chromosome 1
Location:2895208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g018000 RPA12 DNA-directed RNA polymerase I subunit A12.2; (1 of 1) K03000 - DNA-directed RNA polymerase I subunit RPA12 (RPA12, ZNRD1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGGGGTAGAGCGCACCACTGGATTATCGGGGCCAGGTTACGCGGGGACC
Internal bar code:TGTATGCGCCGAAACGTCCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:2456
LEAP-Seq percent confirming:93.3333
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTAAGCTGCTCTGCACAA
Suggested primer 2:GATCGGAATACTTCGCGGGT