Insertion junction: CLIP2.024721_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024721
Chromosome:chromosome 3
Location:6008549
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189605 (1 of 1) K15176 - RNA polymerase-associated protein CTR9 (CTR9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AATCGTCGTCCTCATCGCCGAACAGGTCTCTATGCAGGTCCTGCTGGACA
Internal bar code:TACCAGTGTTAGTCTGTTGAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1542
LEAP-Seq percent confirming:27.8351
LEAP-Seq n confirming:27
LEAP-Seq n nonconfirming:70
LEAP-Seq n unique pos:97

Suggested primers for confirmation by PCR

Suggested primer 1:CCGAGTACGACGAGGTAAGC
Suggested primer 2:TGGATGATGCGGCAGAGTTT