Insertion junction: CLIP2.024721_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024721
Chromosome:chromosome 3
Location:6008552
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189605 (1 of 1) K15176 - RNA polymerase-associated protein CTR9 (CTR9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGGCGGATGATGAGAGGCTGTGGCTGGTAGCAGCGGCCCCCACACAGTAA
Internal bar code:ACTGCTGCTATTATGCCGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:3307
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TGGATGATGCGGCAGAGTTT
Suggested primer 2:CCGAGTACGACGAGGTAAGC