Insertion junction: CLIP2.024722_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.024722
Chromosome:chromosome 12
Location:5830690
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g533201 (1 of 3) PF07452 - CHRD domain (CHRD) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAACAAATCCCGTCAACGGCGGGACCGCGGCGGCTCCCAGGCCGCCC
Internal bar code:TTTTTATTGATTCGTATCGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:488
LEAP-Seq percent confirming:24.3902
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:31
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:TGGCATGCAAAGAGGTAGCA
Suggested primer 2:GTACACACGCACACACACAC