Insertion junction: CLIP2.024737_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024737
Chromosome:chromosome 5
Location:1490032
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g234653 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCACGGTATGGTGCGGTGCAGTACATTTCGCACTGATGATCAGTGTTT
Internal bar code:GGTGCGCGACCGGAAGGGGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1957
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:17
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:GTACCGTGGATAGTCCGCTG
Suggested primer 2:GTGCTCGCAGTCTGCAAAAA