Insertion junction: CLIP2.024744_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024744
Chromosome:chromosome 10
Location:5693434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g459350 OPR49,RAP5 OctotricoPeptide Repeat protein 49; (1 of 2) IPR000104//IPR013584 - Antifreeze protein, type I // RAP domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTATCTCTATTTCCAATATCCCCATCAGGATCTGTACGATGGCGCGAT
Internal bar code:TCGGAAAGGATATGTGGAGAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1738
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:31

Suggested primers for confirmation by PCR

Suggested primer 1:AACGCAGACGACACAAAACG
Suggested primer 2:GTGTAGACGGGAGAGGGGAT