Insertion junction: CLIP2.024751_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024751
Chromosome:chromosome 2
Location:4441943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106100 (1 of 1) IPR000104//IPR029058//IPR029059 - Antifreeze protein, type I // Alpha/Beta hydrolase fold // Alpha/beta hydrolase fold-5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTTCCCAATCTACCCCACACCTTCCCACCCCTAGGATATTCCCAGCCGC
Internal bar code:TACCGTTCGTTCACCCAGCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1776
LEAP-Seq percent confirming:95.5556
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:CGTATCCCACTCTTCCGCTC
Suggested primer 2:GCCAACTATCAATGCGCCTG