Insertion junction: CLIP2.024751_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024751
Chromosome:chromosome 2
Location:4441946
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g106100 (1 of 1) IPR000104//IPR029058//IPR029059 - Antifreeze protein, type I // Alpha/Beta hydrolase fold // Alpha/beta hydrolase fold-5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGAGCAAACCGTTAGTCCATCGCCGGTGGACTCTCAAAATCCATCCTC
Internal bar code:TACCGTTCGTTCACCCAGCCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1740
LEAP-Seq percent confirming:98.1818
LEAP-Seq n confirming:54
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAACTATCAATGCGCCTG
Suggested primer 2:CGTATCCCACTCTTCCGCTC