Insertion junction: CLIP2.024752_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.024752
Chromosome:chromosome 4
Location:3679903
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g228925 intron
lncRNA_TCONS_00099769 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGAGGTGGGGGGGGGTAAAGGAAGTTGGGCCCGCGGGTGACGTCAGCGC
Internal bar code:TGGTCTACCTCATGCCCATACA

Confirmation - LEAP-Seq

LEAP-Seq distance:3673
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCAACACAACTGCCTTCC
Suggested primer 2:AGGTGTTAAGGTGCTGAGGC