Insertion junction: CLIP2.024753_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024753
Chromosome:chromosome 3
Location:3798391
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g169800 (1 of 2) PTHR10060:SF22 - CELL DEATH-RELATED NUCLEASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCCAACCGGTGATGCCGATGTAGGCGTCAAGGTCCAGGAAGGCGCGGAG
Internal bar code:GTTCAACCGTTATGTCTTTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2263
LEAP-Seq percent confirming:96.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGTCAGATAGGCATCACT
Suggested primer 2:GTCATGGTGGGATAGCTCCG