Insertion junction: CLIP2.024757_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024757
Chromosome:chromosome 4
Location:2196891
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220100 (1 of 110) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCCAAGCCAAGCGAGCTGCAAATTCACACACTTACGGATGGAGGTTGGA
Internal bar code:TTATTTGAAGACCGTGGATATA

Confirmation - LEAP-Seq

LEAP-Seq distance:292
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TACCGTATGCGATGTGCCTC
Suggested primer 2:CCCGTTCCTGACAACTTCGA