Insertion junction: CLIP2.024762_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024762
Chromosome:chromosome 17
Location:5805104
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g741300 SAK1 Regulator of acclimation to singlet oxygen intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTATGTGTTTGTGTGTTTTGTGTACGTCTTCACTTGTGTGTAAACAGTT
Internal bar code:CACTTACTAACCTCTGGAGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:3706
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTGCCCTCGTCGTTATC
Suggested primer 2:CGACGGAAGGAGGTACATCG