Insertion junction: CLIP2.024764_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024764
Chromosome:chromosome 13
Location:2273400
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g578550 (1 of 3) IPR000104//IPR011009 - Antifreeze protein, type I // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATCACACACCACTTCTGACTCGCTCACCCCGGGCGTTCACAAGCAGGT
Internal bar code:CCAAGAGACGACTTACTCACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:62
LEAP-Seq percent confirming:10.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CGGTGCAGCGTTATTAACCG
Suggested primer 2:GCTCCGAAGAGGTACAGGTG