Insertion junction: CLIP2.024774_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024774
Chromosome:chromosome 10
Location:3051849
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g441000 (1 of 1) K17498 - transcription factor SPN1 (SPN1, IWS1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCAAACGGGCTGGGGAGCTTAGCACTCACACACGCCCAGGCAGTAGGCCT
Internal bar code:GGTTCCGATTGGGCTTCTATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2770
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCCAACACAACAGCTGC
Suggested primer 2:GCACCGGAATGCTTGCATAG