Insertion junction: CLIP2.024776_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024776
Chromosome:chromosome 3
Location:5528024
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g185000 GTR8,BGS2,CALS2 Callose synthase 2; (1 of 2) K11000 - callose synthase [EC:2.4.1.-] Glc b1-3 Glc (CALS) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGCCGCATGATGATAAAGTAGTCGAACGCCAGCTTGGCGCCAAGCACT
Internal bar code:GGCTACAGGAATGCAACAAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:5200
LEAP-Seq percent confirming:53.8462
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:52

Suggested primers for confirmation by PCR

Suggested primer 1:ATCGCCTGAGAAGCTCATGG
Suggested primer 2:ACCGTACTCATCCTCCGTCA