Insertion junction: CLIP2.024777_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024777
Chromosome:chromosome 7
Location:5603233
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g352250 HEL42 (1 of 2) K14780 - ATP-dependent RNA helicase DHX37/DHR1 [EC:3.6.4.13] (DHX37, DHR1); DEAD/DEAH box helicase intron
Cre07.g352251 (1 of 1) PTHR18934//PTHR18934:SF99 - ATP-DEPENDENT RNA HELICASE // ATP-DEPENDENT RNA HELICASE DHX37-RELATED 3'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAAACGGCAGGCGACGGGCACCTACCCGTTGCTGCCGAACCTGCGCCA
Internal bar code:GGCGGAAGGCAGGAACCTCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:793
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TGGGGGATTGTACCTAGGGG
Suggested primer 2:TCCTTGCCGTCTCTATCCCA