Insertion junction: CLIP2.024778_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.024778
Chromosome:chromosome 1
Location:3422146
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g022100 (1 of 11) PF00632 - HECT-domain (ubiquitin-transferase) (HECT) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGGCTGGCTTGCCGGCTGCGGCTGCGGCTGCGGTTGCTGCGGGGTGTT
Internal bar code:ATAAGATGGTACGGCATTTTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1442
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGTCCGCCATGTCTTTCT
Suggested primer 2:ACACACCTGCTTCTGGTACG