Insertion junction: CLIP2.024792_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.024792
Chromosome:chromosome 12
Location:1640982
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486700 FAP271 (1 of 7) PF07004 - Sperm-tail PG-rich repeat (SHIPPO-rpt); Flagellar Associated Protein 271 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAATGCAAAAGAGGGTAGGGGTTTGGCCCCGGGGGGAGTACTGCGTGGT
Internal bar code:CTGGTAAGTATGAGAAACGCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1331
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCACATACCCAGATCGG
Suggested primer 2:TGTGCGCTTTTTACAAGGCC