Insertion junction: CLIP2.024794_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024794
Chromosome:chromosome 3
Location:4279236
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00065786

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCCGGAATGTGTCAGTTCCCAAATCCCAACCGGGGTTACTTCCCACTCC
Internal bar code:CGTCAATGGCAGTTATCTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:1706
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:AACCCCCATGACAGCTGATG
Suggested primer 2:GCCCTTTACTCGCATGCATG