Insertion junction: CLIP2.024812_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.024812
Chromosome:chromosome 8
Location:2846938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g800935 (1 of 3) IPR004859//IPR027073 - Putative 5-3 exonuclease // 5'-3' exoribonuclease CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGCGACACAAGGTGGCCACCGACCCGCGGTTCACACGGCTGAGGGTG
Internal bar code:CACGTCGGTCACCAGCGACGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:174
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCGGATGAAGCGCATGAT
Suggested primer 2:CGTTTGTGGTGCTTGTGAGG