Insertion junction: CLIP2.024827_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024827
Chromosome:chromosome 9
Location:3464938
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g396065 ALK5 (1 of 9) IPR000719//IPR002290//IPR011009//IPR020635//IPR027916 - Protein kinase domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain // Tyrosine-protein kinase, catalytic domain // Protein kinase-like domain, Apicomplexa; Aurora-like kinase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGACCGCGGCAGGGGCGGTCTTGGGCGCAGCACGCGGCGAAGCATCCAC
Internal bar code:GATTTGCGCCCGCGACGTTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3112
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:ACTTCCATCACTGCGGCTAC
Suggested primer 2:ATCACAATGCGCCATCATGC