Insertion junction: CLIP2.024835_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.024835
Chromosome:chromosome 3
Location:3846825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170250 PPP12 (1 of 2) PTHR13832//PTHR13832:SF267 - PROTEIN PHOSPHATASE 2C // PROTEIN PHOSPHATASE 1K, MITOCHONDRIAL; Phosphoprotein phosphatase 2C-related CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCCGAGGCGCGGGCACAGGCGGCAATGGAGGCGCGACGGAGTGTGGC
Internal bar code:CACAAGTATCTCTGAGCGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1669
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGCCTACACCAACGAAG
Suggested primer 2:CCCCATGCATCTGGAACCTT