Insertion junction: CLIP2.024851_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024851
Chromosome:chromosome 3
Location:205326
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g144204 (1 of 2) PTHR10219 - GLYCOLIPID TRANSFER PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTAACCTCACCTCACGGAGGGTTTTCAGCTGCGCTGACACCTTGCGG
Internal bar code:TGGGTGCACCGGAGTCTGCTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:909
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTTGAGTCGGTCCCCTTC
Suggested primer 2:CCTCGCCTTCCTACATGGTC