Insertion junction: CLIP2.024854_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024854
Chromosome:chromosome 12
Location:1761696
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g485950 (1 of 1) PTHR12480//PTHR12480:SF21 - PHOSPHATIDYLSERINE RECEPTOR // TRANSCRIPTION FACTOR JUMONJI, JMJC DOMAIN-CONTAINING PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGCCCTGCCTCGCGCACACACATACACGCGCGCCTCAGCCCGGCACA
Internal bar code:AATGGGGGTTTTAAACTAACGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1319
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGGGGGAGAGGAGATTGT
Suggested primer 2:TGTCAGCACGCACACTACAT