Insertion junction: CLIP2.024858_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.024858
Chromosome:chromosome 9
Location:1196742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400950 NCT2 (1 of 2) PTHR11662:SF3 - INNER MEMBRANE TRANSPORT PROTEIN RHMT; High-affinity nicotinic acid transporter 5'UTR
Cre09.g401000 SNE3 UDP-N-acetylglucosamine/UDP-glucose 4-epimerase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTCGGTGAGCGAGCGAGCGAGCGAGCGAGCGAGCGAGCGAGCGAGCGT
Internal bar code:TGTTCTTTTGTATGTGTGTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3131
LEAP-Seq percent confirming:94.0
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:CGGGTGAAGGTGAAGGTGAA
Suggested primer 2:GGAAAGGAGGAGGGAAAGGC