Insertion junction: CLIP2.024867_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.024867
Chromosome:chromosome 6
Location:8379083
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g307800 CYN49 (1 of 1) IPR003609//IPR029000 - PAN/Apple domain // Cyclophilin-like domain; Cyclophilin 49 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACACAAATACCGCCTCCTCCCACACACCCACACCTCCACACTTCCAGGCT
Internal bar code:GTGACTGGCACCGCAGGATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1751
LEAP-Seq percent confirming:90.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:AGCATTTGAAGTCCTCGGCA
Suggested primer 2:AGGACTTTGGCATACAGGGC