Insertion junction: CLIP2.024881_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.024881
Chromosome:chromosome 2
Location:5833825
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g117250 (1 of 5) 3.2.1.23 - Beta-galactosidase / Lactase 3'UTR
Cre02.g800244 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTGCACGATGCCGGCGGCACCTCGTATCGCGTATCTATCTAGCGCTG
Internal bar code:GGCTAAATTTAAAGTCTATCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:1946
LEAP-Seq percent confirming:98.0
LEAP-Seq n confirming:49
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:50

Suggested primers for confirmation by PCR

Suggested primer 1:AGAGACCTTCGCAGGGAGAT
Suggested primer 2:CTGTGCGATGTGCTATGTGC