Insertion junction: CLIP2.024891_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.024891
Chromosome:chromosome 6
Location:1165865
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g258200 (1 of 1) PF00004//PF13771 - ATPase family associated with various cellular activities (AAA) (AAA) // PHD-like zinc-binding domain (zf-HC5HC2H) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACGTTCTTTCGGTTTCCATCCTCAATAGGGCCCAGGAAGGCACCCAGG
Internal bar code:GAACTGCCCGCCGTGGTACCGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2678
LEAP-Seq percent confirming:7.5
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:111
LEAP-Seq n unique pos:120

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAGGGTTTTCAGACGGCA
Suggested primer 2:GGAAGCGCGCTATGTTGAAG