Insertion junction: CLIP2.024894_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.024894
Chromosome:chromosome 16
Location:4609090
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g670850 (1 of 1) PTHR22975:SF2 - ECHINUS SPLICE FORM 3 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCTTGCAAGAGCAACACTCCACTCATCTGGCACGCTGGCCGCCCTACCC
Internal bar code:TGGGATACCGGCAGTGATGACC

Confirmation - LEAP-Seq

LEAP-Seq distance:1125
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCAGTTTGGTGGTCTCCC
Suggested primer 2:TGGGTGTGTGATCAAGGAGC